Installing pyroe

The pyroe package can be accessed from its github repository, installed via pip. To install the pyroe package via pip use the command:

pip install pyroe

Alternatively, pyroe can be installed via bioconda, which will automatically install the variant of the package including load_fry, and will also install bedtools to enable faster construction of the expanded references. This installation can be performed with the following shell command:

conda install pyroe -c bioconda